Bookcover of Biological Sequence Matching
Booktitle:

Biological Sequence Matching

Using Boolean Algebra and Fuzzy Logic: A Comparative Analysis

LAP LAMBERT Academic Publishing (2012-04-28 )

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ISBN-13:

978-3-8484-8162-0

ISBN-10:
3848481626
EAN:
9783848481620
Book language:
English
Blurb/Shorttext:
Biological sequence alignment is one of the crucial tasks of computational biology, and provides base for other tasks of bioinformatics. It has been consistent effort of researchers to employ different techniques for sequence alignment so as to get better results. This book is an adaptation of the master’s dissertation, which was a research initiative carried in the field of biological sequence alignment. The work was about two distinct approaches to sequence matching – Boolean algebra and Fuzzy logic – a two-valued logic and a multi-valued logic. Both the methods determine the similarity between the sequences by direct comparison method using the operations of Boolean algebra and Fuzzy logic respectively. Then on the basis of their degree of similarity, multiple DNA sequences are aligned progressively using dynamic programming to ensure optimal alignment. The methods are implemented in MATLAB® and tested on various sets of DNA sequences of different ‘influenza A virus’ types taken from NCBI bank. Three different aspects of the discussed approaches have been assessed using different data sets.
Publishing house:
LAP LAMBERT Academic Publishing
Website:
https://www.lap-publishing.com/
By (author) :
Nivit Gill, Shailendra Singh
Number of pages:
128
Published on:
2012-04-28
Stock:
Available
Category:
Other
Price:
59.00 €
Keywords:
fuzzy logic, Bioinformatics, Dynamic programming, Sequence Alignment, Boolean Algebra, biological sequences, multiple sequence alignment

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